Indulge Guilt-Free: The Ultimate Gluten-Free & Dairy-Free Carrot Cake Cupcakes Recipe
Prepare to delight your taste buds with these truly exceptional Gluten-Free Carrot Cake Cupcakes. Each bite offers a harmonious blend of fluffy texture, rich moisture, and the comforting warmth of spices like cinnamon, ginger, and nutmeg. What makes these cupcakes even more special is their simplicity, crafted with a convenient 1-to-1 gluten-free baking flour, and crowned with a silky-smooth, dairy-free cream cheese frosting that’s utterly irresistible.
While my appreciation for carrot cake knows no season – indeed, it’s often my go-to choice for a birthday celebration – the arrival of Easter each year sparks a renewed desire to share a fresh take on this beloved classic. This year, I’m thrilled to present these exquisite gluten-free carrot cake cupcakes, a culmination of careful testing and a passion for creating inclusive, delicious baked goods. They offer all the beloved flavors and textures of traditional carrot cake, without any gluten or dairy, making them perfect for sharing with everyone.

For those curious about my past carrot cake creations, a comprehensive list awaits you at the end of this post. You’ll quickly see that my culinary journey is deeply rooted in a profound love for all things carrot cake, and these cupcakes are the latest testament to that enduring affection.
Table of contents
- What makes these gluten-free carrot cake cupcakes so good?
- Ingredients and substitutions
- How to make gluten-free carrot cupcakes
- Tips for the best dairy-free cream cheese frosting
- Measuring ingredients
- Storage and freezing tips
- Key recipe tips
- Recipe FAQs
- More carrot cake recipes
- More gluten-free recipes
What Makes These Gluten-Free Carrot Cake Cupcakes So Good?
Crafting the perfect gluten-free cupcake requires attention to detail and a commitment to flavor and texture. Here’s what sets this recipe apart:
- Rigorous Testing and Perfection: My journey to create these cupcakes began over a year ago. I continually refined the recipe, going back to it repeatedly to make subtle tweaks. The goal was to achieve a tender, moist crumb – avoiding the common pitfalls of gluten-free baking, such as dense, grainy, or overly mushy textures. Every iteration brought us closer to this perfectly balanced and delightful result.
- Effortless with 1-to-1 Gluten-Free Baking Flour: Forget the hassle of blending multiple specialty flours! This recipe utilizes a high-quality 1-to-1 gluten-free baking flour blend, which acts as a seamless substitute for traditional all-purpose flour. This convenience makes gluten-free baking accessible and enjoyable for everyone, ensuring consistent results every time.
- No Electric Mixer Needed for the Batter: While an electric mixer is a handy tool for achieving that light, airy dairy-free cream cheese frosting, the cupcake batter itself comes together with minimal fuss. All you need are two bowls, a whisk, and a spatula, making it a simple and straightforward process even for novice bakers.
- Clever Baking Tricks for Optimal Texture: This recipe incorporates a few strategic “secrets” that elevate the final product. The inclusion of cornstarch, for instance, helps create a remarkably light and fluffy texture, counteracting the potential density of gluten-free flours. Additionally, allowing the batter to rest ensures proper hydration of the gluten-free flour, contributing to an incredibly moist and tender cupcake.
- Completely Dairy-Free: Beyond being gluten-free, these delicious cupcakes are also entirely dairy-free. They are generously crowned with a rich, smooth, and utterly decadent dairy-free cream cheese frosting, ensuring everyone can enjoy this classic treat without dietary concerns.
Essential Ingredients and Smart Substitutions
Understanding each ingredient’s role is key to baking success. Below is a detailed look at the components of these gluten-free carrot cake cupcakes and their possible substitutions. For precise quantities, please refer to the comprehensive recipe card at the conclusion of this post.

Carrots: The star of the show! You’ll need 1 1/4 cups of finely grated carrot. Finely grating them on the small holes of a box grater is crucial; this ensures the carrots disperse evenly throughout the batter, contributing maximum moisture and natural sweetness without creating large, chunky bits. Always remember to peel, wash, and thoroughly dry your carrots before grating to maintain the perfect texture and flavor.
Gluten-Free Flour: As previously highlighted, a 1-to-1 gluten-free baking flour is your best friend here. I personally use Bob’s Red Mill (this is not a sponsored endorsement, just a personal preference), but many similar brands offer excellent results. The key is to ensure your chosen blend contains xanthan gum. Xanthan gum is vital in gluten-free baking as it provides the necessary binding and structure that gluten typically offers, preventing crumbly baked goods. Be aware that different brands can lead to slight variations in texture, so consistent measurement is important.
Cornstarch: During the extensive testing phase of this recipe, I noticed that an excessive amount of gluten-free flour could sometimes result in a slightly grainy texture. To counteract this, I strategically reduced some of the flour and replaced it with cornstarch. This small but significant change is what helps create a wonderfully light, airy, and fluffy crumb, avoiding any undesirable heaviness.
Baking Powder and Baking Soda: These two powerful leavening agents work in tandem to give our cupcakes their beautiful rise and tender structure. Using both ensures an optimal chemical reaction that contributes to the airy texture.
Salt: A pinch of fine sea salt or kosher salt is essential. It doesn’t just add a salty note; it plays a critical role in balancing the sweetness of the sugars and enhancing all the other flavors in the cupcake, making them truly pop.
Spices: The soul of any great carrot cake! Aromatic ground cinnamon, ginger, and nutmeg create that signature warm and inviting flavor profile. For an extra layer of complexity, you could consider adding a touch of allspice or a tiny pinch of ground cloves, though the core trio provides ample deliciousness.
Eggs: Three large eggs, brought to room temperature, are indispensable. They provide crucial moisture, act as a binder to hold the batter together, and contribute significantly to the cupcakes’ rise and overall structure. Room temperature eggs emulsify better with other ingredients, leading to a smoother batter and a more uniform bake.
Sugars: This recipe employs a delightful combination of dark brown sugar and cane sugar. The dark brown sugar brings a deep, molasses-like flavor and additional moisture, contributing to a more tender crumb. Cane sugar provides a clean sweetness and helps achieve the perfect texture. Light brown sugar and granulated sugar can also be used as suitable alternatives if needed.
Oil: To ensure a neutral flavor profile that lets the carrot and spices shine, vegetable oil is my preferred choice. It also contributes significantly to the cupcakes’ moistness. Other neutral oils like avocado oil or canola oil are excellent substitutes. Olive oil can also work, but be mindful of its more distinct flavor, especially with extra virgin varieties.
Almond Milk: Gluten-free flours are known for their absorbency, which means they require a bit more liquid to achieve the ideal batter consistency. A 1/4 cup of unsweetened almond milk does the trick, keeping the recipe dairy-free. Feel free to use any other plant-based milk you prefer, or regular dairy milk if a dairy-free recipe isn’t a strict requirement for you.
Vanilla Extract: For the most authentic and rich flavor, always opt for real vanilla extract. It enhances the sweetness and depth of all the other ingredients, elevating the overall taste of your cupcakes.
Plant-Based Cream Cheese (for Frosting): For a truly dairy-free frosting, you’ll need a high-quality plant-based cream cheese. I’ve had success with both Earth’s Own and Daiya brands (again, not sponsored, just personal testing). I’ve found Daiya to be particularly good for its creamy texture, which closely mimics traditional dairy cream cheese. Of course, if dairy isn’t an issue, standard dairy cream cheese works perfectly.
Plant-Based Butter (for Frosting): Any plant-based butter that explicitly states it’s suitable for baking will work wonderfully in this frosting. These are formulated to behave similarly to dairy butter, ensuring your frosting whips up beautifully. If dairy is not a concern, feel free to use regular dairy butter.
Powdered Sugar: This finely milled sugar is crucial for both sweetening and thickening the cream cheese frosting, giving it that classic smooth consistency. Adjust the amount to achieve your desired level of sweetness and thickness. I highly recommend sifting your powdered sugar to prevent any lumps, ensuring a flawlessly smooth frosting.
How to Make Gluten-Free Carrot Cupcakes (Step-by-Step Guide)
Creating these delightful carrot cupcakes is a straightforward and rewarding process. Below is a brief, visual overview of the steps involved, accompanied by photos to guide you. For the complete, detailed instructions and measurements, please refer to the recipe card at the very end of this article.








Pro Tips for the Best Dairy-Free Cream Cheese Frosting
Creating a stellar dairy-free cream cheese frosting can sometimes be a little different from its dairy counterpart. Follow these tips for a perfectly smooth and creamy result:
- Mind the Room Temperature: While I recommend bringing your dairy-free butter and cream cheese to room temperature, be aware that plant-based alternatives often soften much faster than dairy products. This means they usually require less time out of the fridge, typically just 10-15 minutes, to reach the ideal consistency for creaming. Over-softening can lead to a runny frosting.
- Assess Your Brand’s Softness: The consistency of plant-based cream cheeses can vary significantly between brands. Some varieties might already be quite soft straight from the refrigerator. If your chosen brand feels pliable and ready to mix, you can skip or significantly reduce the room temperature step entirely to prevent an overly liquid frosting.
- Adjust Powdered Sugar for Texture: Powdered sugar is key to both the sweetness and thickness of your frosting. Don’t hesitate to add a little more if you prefer a firmer, sweeter frosting. Conversely, if you find it too thick, a tiny splash of a neutral plant-based milk (like almond or oat) can help loosen it, but add it very sparingly.
- Chill if Too Runny: If, despite your best efforts, your frosting turns out a bit too runny, don’t despair! Simply place it in the refrigerator for 30-60 minutes. Chilling will help it firm up to the perfect piping or spreading consistency. Give it a quick re-whip before frosting.
- Avoid Adding Extra Liquids: Due to the inherently softer nature of many dairy-free butters and cream cheeses, it’s generally best to avoid adding additional liquids such as vanilla extract or plant-based milk directly into the frosting unless absolutely necessary. These can make the frosting too thin and difficult to manage. If you must add vanilla, use a high-quality vanilla paste or powder instead.
Precision in Measuring Ingredients is Key
Baking, especially with gluten-free flours, is a science where accuracy can significantly impact your results. For your convenience, traditional US cup measurements are provided in the recipe card for this recipe. However, to ensure the highest level of precision, I strongly advocate for using weight and volume measurements where specified. When you see grams (g), use a reliable kitchen scale to weigh your ingredients, as this is the most accurate method for dry ingredients like flour. For milliliters (ml), a liquid measuring cup will give you the most precise reading. Smaller quantities of ingredients, such as leavening agents and spices, are given in teaspoons and tablespoons, for which standard measuring spoons are appropriate. Accurate measurements prevent common baking mishaps, ensuring your gluten-free carrot cake cupcakes turn out perfectly every time.
Optimal Storage and Freezing Tips
Proper storage is essential to maintain the freshness and delightful texture of your gluten-free carrot cake cupcakes.
Unfrosted Cupcakes: If you’re not planning to frost them immediately, unfrosted cupcakes can be stored in an airtight container at room temperature for 2-3 days. Make sure they are arranged in a single layer to prevent the tops from becoming sticky or tacky, which can happen with moist baked goods.
Frosted Cupcakes: Due to the dairy-free cream cheese frosting, frosted carrot cupcakes should always be stored in an airtight container in the refrigerator. When properly stored, they will remain fresh and delicious for up to 5 days. Bringing them to room temperature for about 15-20 minutes before serving can enhance their texture and flavor.
Freezing for Later Enjoyment: These versatile cupcakes are also freezer-friendly! You can store them (either frosted or unfrosted) in the freezer for up to 3 months. For frosted cupcakes, I recommend freezing them uncovered for about an hour until the frosting is firm, then wrapping each cupcake individually in plastic wrap before placing them in an airtight freezer-safe container or bag. This prevents freezer burn and keeps the frosting intact. Thaw them overnight in the refrigerator or at room temperature for a few hours before serving.

Key Recipe Tips for Gluten-Free Carrot Cake Cupcake Success
Achieving bakery-quality gluten-free carrot cake cupcakes is easier than you think with these essential tips:
- Select the Right Gluten-Free Flour: Always use a 1-to-1 gluten-free baking flour blend that clearly lists xanthan gum in its ingredients. Xanthan gum is crucial for providing structure and preventing your gluten-free baked goods from being crumbly. Different brands can perform slightly differently, so consistency is key.
- Master Flour Measurement: If you don’t own a kitchen scale (which is highly recommended for baking accuracy), employ the “spoon and level” method for measuring your gluten-free flour. Spoon the flour into your dry measuring cup until it’s overflowing, then use the back of a knife or a straight edge to level it off. Never scoop flour directly from the bag, as this compacts it, resulting in too much flour and a dry, dense cupcake.
- Allow the Batter to Rest: This step is non-negotiable for gluten-free baking. Letting the batter sit for 20 minutes gives the gluten-free flour ample time to fully absorb the wet ingredients. This hydration process thickens the batter, prevents a gritty texture, and contributes to a much moister and fluffier final product with a better rise.
- Finely Grate Your Carrots: For optimal flavor distribution and moisture, it’s imperative to finely grate your carrots. Use the smallest holes on your box grater. This ensures the carrots blend seamlessly into the batter, releasing their sweetness and moisture effectively. Avoid using pre-shredded carrots from the grocery store, as they are often too dry and coarsely cut for baking, impacting the texture and moisture of your cupcakes.
- Don’t Overfill Cupcake Liners: This recipe is designed to yield 15 perfectly sized cupcakes. Resist the urge to cram all the batter into a standard 12-cup muffin pan. Overfilling liners can lead to cupcakes that overflow, bake unevenly, or have unsightly domed tops. Each cupcake liner should be filled approximately 3/4 full to allow for proper rising.
- Choose Quality Cupcake Liners: For easy release and beautiful presentation, I highly recommend using parchment paper liners. Unlike traditional paper liners, parchment liners prevent sticking to the sides and bottoms of the cupcakes, ensuring every bit of your delicious creation comes out intact.
- Ensure Complete Cooling: Patience is a virtue when it comes to frosting. It’s absolutely crucial to let your cupcakes cool completely on a wire rack before you even think about adding frosting. If they are still warm, the frosting will melt and slide right off. Moreover, gluten-free baked goods often need to cool entirely to firm up properly; otherwise, they can be quite crumbly when warm.
- Verify Gluten-Free Certification: For those with severe gluten sensitivities or celiac disease, always double-check that your cornstarch, baking powder, baking soda, and all spices are certified gluten-free. Cross-contamination can be a significant concern, so look for certified products to ensure your cupcakes are truly safe.

Recipe FAQs: Your Gluten-Free Carrot Cake Cupcake Questions Answered
Absolutely, yes! I rigorously tested this recipe with both gluten-free and traditional all-purpose flour to ensure its versatility. If you don’t require a gluten-free option, you can substitute the 1-to-1 gluten-free baking flour and cornstarch with an equal total amount of all-purpose flour (e.g., if the GF flour + cornstarch is 200g, use 200g all-purpose flour). No other adjustments to the recipe are needed, making it accessible for all bakers.
While butter can add a rich flavor, I specifically chose oil for this carrot cake recipe because it contributes significantly to the characteristic moistness and tender crumb. Oil, being 100% fat, keeps cakes incredibly moist, whereas butter (which contains water solids) can lead to a slightly denser, less airy texture. I haven’t tested an equal amount of butter in place of the oil, as it will likely result in a different texture and potentially require other adjustments. If you do decide to experiment with butter, please let me know your results – I’m always curious to hear about recipe adaptations!
This particular recipe relies heavily on three large eggs for structure, moisture, and leavening, which are critical components in gluten-free baking. Unfortunately, I have not yet tested this recipe with egg replacements (like flax eggs, applesauce, or commercial egg substitutes). Successfully substituting eggs in a gluten-free context can be complex, often requiring significant adjustments to other ingredients to maintain the desired texture and rise. Therefore, I cannot guarantee a successful vegan adaptation without further testing.
Yes, absolutely! The resting period of 20 minutes is a crucial step that makes a notable difference in the final texture of these gluten-free carrot cake cupcakes. During this time, the gluten-free flour has a chance to fully hydrate and absorb the wet ingredients. This process helps to thicken the batter, preventing it from being too thin, and contributes to a superior rise and a more tender, less crumbly cupcake. I specifically tested a batch without resting the batter, and those cupcakes did not achieve the same impressive volume or desirable fluffy texture.
There’s no need to add separate xanthan gum to this recipe, provided you are using a 1-to-1 gluten-free baking flour blend that already contains it. Most reputable 1-to-1 blends are formulated with xanthan gum because it acts as a vital binding agent and emulsifier, mimicking the properties of gluten. This ensures your batter has enough structure and elasticity to hold together, providing volume and preventing the characteristic crumbling often associated with gluten-free baked goods.
Explore More Carrot Cake Recipes from My Collection
If you’ve fallen in love with these cupcakes, you’ll be thrilled to know my passion for carrot cake extends to many other delightful variations. Dive into these recipes to find your next favorite carrot cake treat:
- Almond Flour Carrot Cake
- Small Carrot Cake Recipe
- Carrot Cake Loaf with Cashew Cream Frosting
- Carrot Cake Donuts
- Carrot Cake Ice Cream Sandwiches
- Coconut Carrot Bundt Cake
Discover More Delicious Gluten-Free Recipes
Beyond carrot cake, my kitchen is always experimenting with new and exciting gluten-free creations. Here are some other tried-and-true gluten-free recipes that are sure to please:
- Almond Flour Blondies
- Almond Flour Zucchini Muffins
- Oat Flour Brownies
- Lemon Almond Flour Cake
- Almond Flour Vanilla Cupcakes
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If you embark on the delightful journey of making this recipe, I would absolutely love to hear your thoughts and experiences in the comments section below! Your feedback helps me and other bakers grow and enjoy these culinary adventures even more.
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Gluten-Free Carrot Cake Cupcakes
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5 from 1 review
- Author: Leanne
- Prep Time: 20 minutes
- Cooling Time: 1 hour
- Cook Time: 28 minutes
- Total Time: 1 hour 48 minutes
- Yield: 15 cupcakes
- Category: Dessert
- Method: Bake
- Cuisine: American, Canadian
- Diet: Gluten Free
Description
These Gluten-Free Carrot Cake Cupcakes are the epitome of fluffy and moist perfection, bursting with sweet, finely grated carrots and a symphony of warm spices. Each cupcake is generously topped with a delectable dairy-free cream cheese frosting, making them an ideal treat for any occasion and suitable for those with dietary restrictions. Enjoy the rich, comforting flavors of carrot cake in a convenient, individual serving!
Ingredients
For the cupcakes:
- 1 1/4 cup (165g) gluten-free baking flour (use a 1-to-1 blend with xanthan gum, see note)
- 1/4 cup (35g) cornstarch (ensure certified gluten-free)
- 1 1/4 teaspoons baking powder (ensure certified gluten-free)
- 1/4 teaspoon baking soda (ensure certified gluten-free)
- 1/4 teaspoon fine sea salt
- 1 1/2 teaspoons ground cinnamon (ensure certified gluten-free)
- 1/2 teaspoon ground ginger (ensure certified gluten-free)
- 1/4 teaspoon ground nutmeg (ensure certified gluten-free)
- 3 large eggs, at room temperature (essential for texture)
- 1/2 cup (100g) packed dark brown sugar (adds moisture and rich flavor)
- 1/4 cup (60g) cane sugar (for balanced sweetness)
- 3/4 cup (180ml) neutral vegetable oil (e.g., canola, avocado, or sunflower)
- 1/4 cup (60ml) unsweetened almond milk (or other plant-based milk)
- 1 teaspoon pure vanilla extract
- 1 1/4 cup (125g) finely grated carrot (freshly grated, not pre-shredded)
For the dairy-free cream cheese frosting:
- 8 ounces (227g) cold plant-based cream cheese (Daiya brand recommended for texture)
- 4 ounces (113g) cold plant-based butter (ensure suitable for baking)
- 3 cups (360g) powdered sugar, sifted if lumpy (adjust to taste and desired consistency)
- Chopped walnuts for topping (optional, adds a delightful crunch)
Instructions
- Preheat your oven to 325°F (160°C). Line a 12-cup cupcake pan with paper liners, and a second pan with 3 additional liners to accommodate all the batter.
- In a medium-sized bowl, whisk together the gluten-free flour, cornstarch, baking powder, baking soda, salt, cinnamon, ginger, and nutmeg until well combined. This ensures even distribution of leavening and spices.
- In a separate large bowl, whisk together the room temperature eggs, dark brown sugar, cane sugar, vegetable oil, unsweetened almond milk, and vanilla extract until the mixture is smooth and well emulsified.
- Gradually add the dry ingredients mixture to the wet mixture. Use a spatula to gently stir until the ingredients are *just* combined. Be careful not to overmix, as this can affect the cupcake’s tenderness.
- Fold in the finely grated carrots until they are evenly distributed throughout the batter. Once combined, let the batter rest at room temperature for 20 minutes. This resting period is vital for the gluten-free flour to properly hydrate and thicken.
- After resting, divide the batter evenly among the 15 prepared cupcake liners, filling each approximately 3/4 full. This allows for optimal rise without overflowing.
- Bake for 26-28 minutes, or until a wooden skewer or toothpick inserted into the center of a cupcake comes out clean. The baking time may vary slightly depending on your oven.
- Allow the baked cupcakes to cool in their pans for about 10 minutes. This helps them set and firm up. Then, carefully transfer them to a wire rack to cool completely before frosting. Gluten-free cupcakes can be crumbly if handled while warm.
- To prepare the frosting, add the cold plant-based cream cheese and cold plant-based butter to a large mixing bowl. Using an electric mixer on medium-high speed, cream them together until smooth and light. Gradually add the sifted powdered sugar, beating until the frosting is thick, smooth, and creamy. If it’s too soft, chill for 30 minutes.
- Once the cupcakes are completely cool, generously frost each one with the dairy-free cream cheese frosting. Garnish with chopped walnuts if desired for extra flavor and texture.
- Store frosted cupcakes in an airtight container in the fridge for up to 5 days to maintain freshness and frosting integrity. Unfrosted cupcakes can be stored at room temperature for 2-3 days.
Notes
- It is crucial to use a 1-to-1 gluten-free baking flour blend that specifically states it contains xanthan gum. This ingredient is essential for providing structure and elasticity to gluten-free baked goods. My preferred brand for this recipe is Bob’s Red Mill.
- For the most accurate flour measurement, especially with gluten-free flours, use the “spoon and level” method. Gently spoon the flour into your measuring cup and level it off with a straight edge. Avoid scooping directly from the bag, as this compacts the flour and can result in a dry, dense cupcake.
- Do not skip the 20-minute resting period for the batter. This allows the gluten-free flour to properly hydrate and absorb the liquids, leading to a moister cupcake with better rise and a more tender crumb.
- Ensure your carrots are very finely grated. Using the small holes of a box grater is ideal for this. Finely grated carrots disperse evenly, contribute maximum moisture, and avoid a chunky texture. Pre-shredded carrots are usually too coarse and dry for baking applications like this.
- This recipe yields 15 cupcakes. It’s important not to overfill your cupcake liners. Each liner should be filled about 3/4 full. Attempting to fit all the batter into a 12-cup muffin pan will cause the cupcakes to overflow and bake unevenly.
- Allow the cupcakes to cool completely on a wire rack before applying any frosting. If they are still warm, the frosting will melt and slide off. Additionally, gluten-free baked goods often need to fully cool to firm up, as they can be quite delicate and crumbly when warm.
- For individuals with celiac disease or severe gluten sensitivity, always verify that your cornstarch, baking powder, baking soda, and all spices are certified gluten-free to prevent any cross-contamination.
- For more in-depth advice, troubleshooting tips, and ingredient insights, please refer to the detailed sections above the recipe card. These sections offer valuable information to ensure your baking success.