Delicious & Easy Banana Protein Muffins: Your Healthy On-The-Go Treat!
Looking for a wholesome, protein-packed snack or breakfast that’s both easy to make and incredibly delicious? These banana protein muffins are exactly what you need! Each muffin delivers a generous 9 grams of protein and can be ready in under 30 minutes, making them perfect for busy mornings, a nutritious post-workout recovery, or a satisfying mid-afternoon pick-me-up. Crafted with nourishing oat flour and naturally sweetened, they are a guilt-free indulgence the whole family will love.

Muffins have always been a favorite for food prepping in my household. They’re fantastic for grab-and-go breakfasts, and I especially love including them in my girls’ lunchboxes as a healthier alternative to a traditional sandwich. It’s so much easier to control the ingredients this way, and knowing these banana protein muffins offer significantly more protein than a typical sandwich makes them a superior choice for sustained energy and satiety.
Incorporating extra protein into your diet is always a smart move for overall health, muscle maintenance, and keeping you feeling full longer. If you’re eager to explore more delicious protein-rich recipes, be sure to check out my chocolate protein pancakes, protein overnight oats, no-bake protein bars, or chocolate protein banana bread. Each offers a fantastic way to boost your protein intake with wholesome, clean ingredients.
Why You’ll Fall in Love with These Healthy Protein Muffins
These banana protein muffins aren’t just a treat; they’re a powerhouse of nutrition and convenience. Here’s why they’re destined to become a staple in your kitchen:
- Packed with 9 Grams of Protein Per Muffin: Yes, you read that correctly! Each of these delicious muffins delivers a substantial 9 grams of protein. This makes them an excellent choice for supporting muscle recovery after a workout, providing sustained energy throughout your morning, or simply helping you feel fuller for longer. It’s a fantastic way to sneak in extra protein without compromising on taste. If you’re a protein enthusiast, you might also enjoy my dairy-free & gluten-free waffles, which boast an impressive 12 grams of protein per waffle.
- Made with Wholesome Whole Grains: Say goodbye to refined flours! These muffins are crafted exclusively with whole grain oat flour. Whole grains are rich in fiber, which aids digestion and helps regulate blood sugar levels, providing a steady release of energy instead of a sudden spike and crash. Plus, oat flour gives these muffins a wonderfully tender and moist texture.
- Naturally Sweetened for a Healthier Indulgence: We use just a touch of pure maple syrup to sweeten these banana protein muffins, letting the natural sweetness of ripe bananas shine through. This avoids the excessive sugars often found in store-bought muffins, offering a healthier way to satisfy your sweet cravings.
- Dietary Friendly: Gluten-Free, Dairy-Free, and Oil-Free: Catering to various dietary needs, these muffins are naturally free from gluten, dairy, and added oils. They’re built on a foundation of real, clean food ingredients, making them suitable for those with sensitivities or anyone looking to reduce these components in their diet without sacrificing flavor or texture.
- Effortless One-Bowl Preparation: Just like my popular almond flour blackberry muffins, this recipe minimizes cleanup! All the ingredients are mixed together in a single bowl, making the baking process quick, easy, and virtually mess-free. Less time scrubbing dishes means more time enjoying your delicious creations!
Key Ingredient Notes for Perfect Protein Muffins

For a complete list of ingredients and precise amounts, please refer to the detailed recipe card at the bottom of this page. Here are some specific tips to help you select the best ingredients for these protein-packed banana muffins:
- Oat Flour: I highly recommend making your own oat flour at home from rolled oats for the freshest results, but high-quality store-bought oat flour works wonderfully too. Important Note for Gluten-Free Needs: While oats are naturally gluten-free, they can often be processed in facilities that also handle gluten-containing grains, leading to cross-contamination. If you have gluten sensitivity or Celiac disease, it is crucial to use certified gluten-free oat flour. Furthermore, I suggest choosing organic oat flour to avoid glyphosate residues, a common pesticide used on conventionally grown oats.
- Vanilla Protein Powder: The choice of protein powder can significantly impact the texture and taste of your muffins. I personally love Just Ingredients vanilla protein powder because it’s a truly clean product with no weird textures or artificial aftertastes. However, you can use any high-quality vanilla or even unflavored protein powder you prefer. For the best results and consistency, a plant-based protein powder (like pea, rice, or a blend) is highly recommended over whey, as whey can sometimes make baked goods dense and dry.
- Peanut Butter: Opt for natural peanut butter where the ingredients list contains only peanuts, or peanuts and salt. Avoid brands with added sugars, hydrogenated oils, or emulsifiers. Crucially, make sure it’s “drippy” and well-stirred, not the thick, compact butter from the bottom of the jar. This ensures proper mixing and moisture in your muffins.
- Chocolate Chips: If you need these muffins to be dairy-free, be sure to select dairy-free chocolate chips. When choosing a brand, look for options with minimal ingredients – ideally just chocolate liquor (or cocoa mass), cane sugar, and cocoa butter. Brands that are Fair Trade certified and/or organic are even better for ethical and health reasons. Excellent choices include Equal Exchange and 365 Brand. Remember, chocolate chips are optional, so feel free to omit them if you prefer less added sugar.
Flexible Substitutions & Delicious Additions
These banana protein muffins are incredibly adaptable, allowing you to tailor them to your dietary needs or simply switch up the flavors.
Oat Flour Alternatives: If oat flour isn’t readily available, you have a couple of options. For those who don’t require a gluten-free recipe, white whole wheat flour can be used as a direct substitute, offering a similar whole grain benefit. Alternatively, a 1:1 gluten-free baking flour blend can also work well, just ensure it’s specifically designed for baking. Be aware that using different flours might slightly alter the muffin’s texture, but they will still be delicious.
Chocolate Chip Variations: While I adore the extra sweetness and flavor that chocolate chips bring (and my girls certainly do too!), they are completely optional. If you’re aiming to reduce sugar content, feel free to leave them out. You could also experiment with other mix-ins like dried cranberries, chopped dried apricots, or a sprinkle of shredded coconut for different flavor profiles.
Boost with Nuts: For added crunch, healthy fats, and an extra layer of flavor, consider folding in some chopped nuts. Walnuts or pecans would be an excellent choice, complementing the banana and cinnamon beautifully. They also contribute additional nutrients and make the muffins even more satisfying.
Making it Nut-Free: Since this recipe calls for peanut butter, a nut-free alternative is essential for those with allergies. You can easily replace the peanut butter with a no-added-sugar sunflower seed butter (like SunButter). Alternatively, for an oil-free and nut-free option, you can use an equal amount of melted coconut oil, avocado oil, or a light olive oil. Just be aware that replacing the peanut butter with oil will reduce the protein content of the muffins, as peanut butter is a significant protein source in this recipe.
Vegan Adaptation: Although I haven’t personally tested a fully vegan version, this recipe should be quite adaptable. To make it vegan, you can replace the eggs with flax eggs (2 tbsp ground flaxseed mixed with 6 tbsp water, let sit for 5-10 minutes until gel-like). Remember that this will slightly decrease the overall protein content, so ensure you use a high-quality vegan protein powder to compensate. All other ingredients are typically plant-based, assuming you choose dairy-free chocolate chips.
Step-by-Step: Crafting Your Banana Protein Muffins
Making these nutritious muffins is incredibly straightforward. Follow these simple steps for perfect results every time:




Expert Tips for Baking the Best Banana Protein Muffins
- Embrace Previously Frozen Bananas: This is a game-changer! Bananas that have been frozen and then thawed release more moisture and become naturally sweeter, intensifying the banana flavor and contributing to a superior, more tender muffin texture. I always keep a stash of overly ripe, brown bananas in my freezer specifically for baking. To thaw, simply leave them at room temperature for a couple of hours or microwave them on a safe plate for 1-2 minutes until soft.
- Choose a High-Quality, Clean, Plant-Based Protein Powder: The type and quality of your protein powder make a big difference in the final product. I’ve only tested this recipe with plant-based protein powders (like pea or rice protein blends) because whey protein can often lead to a denser, drier texture in baked goods. Brands like Just Ingredients are excellent for their clean ingredients and neutral taste profile. I’ve also heard great things about Sprout Living. Using a protein powder that dissolves well and doesn’t have an overpowering flavor is key to a delicious muffin.
- Utilize Room Temperature Eggs: For the silkiest batter and best overall texture in your muffins, ensure your eggs are at room temperature. Room temperature eggs emulsify more effectively with other ingredients, creating a smoother, more uniform batter and leading to a lighter, fluffier final product. If you forget to take them out in advance, simply place them in a bowl of warm (not hot) water for about 10 minutes.
- For Bakery-Style Appeal: Want your muffins to look as good as they taste? For that beautiful, professional bakery-style finish, sprinkle a few extra chocolate chips (or chopped nuts) on top of each muffin before baking. As they bake, the chocolate will melt slightly and create lovely pools on the surface, adding visual appeal and an extra burst of flavor.

Choosing the Best Protein Powder for Your Muffins
The type of protein powder you use is crucial for the success of these banana protein muffins, both in terms of texture and flavor. As mentioned, I have exclusively tested this recipe with plant-based protein powders. Why plant-based? Whey protein, while excellent for shakes, tends to react differently in baking, often resulting in baked goods that are too dense, dry, or rubbery. Plant-based proteins, on the other hand, integrate more seamlessly, contributing to a moist and tender muffin.
For a fantastic taste and texture, I’ve had great success with vanilla plant-based protein. Brands like Truvani are a personal favorite for their clean ingredients and excellent flavor. I’ve also heard positive feedback about Sprout Living, though I haven’t tried it myself. Another solid choice is Garden of Life, which often includes added nutrients for an extra health boost. While vanilla protein adds a lovely subtle flavor, an unflavored protein powder would also work perfectly, allowing the banana and cinnamon to truly shine.
Clean Food Tip: When selecting any protein powder, make informed choices for optimal health. Look for one that is organic to ensure it’s free from synthetic pesticides and genetically modified organisms (GMOs). Prioritize powders that are low in added sugars and completely free of artificial flavors. If possible, avoid products that list “natural flavors” as these can sometimes be highly processed. Also, steer clear of soy protein concentrate or isolate, which can be highly processed and may not be ideal for everyone. Many protein powders use sweeteners like stevia leaf or erythritol. While stevia leaf (the whole leaf extract, not highly processed derivatives) is generally considered acceptable, and organic erythritol in minimal doses is usually fine, always check the source and amount to align with your personal preferences for clean eating.

Storage Tips for Freshness & Convenience
These banana protein muffins are fantastic for meal prepping, and knowing how to properly store them ensures you can enjoy their deliciousness for days, or even months!
To Store: Once your muffins have completely cooled to room temperature, transfer them to an airtight storage container. They will maintain their freshness and delightful texture on the counter for 2-3 days. For extended freshness, store them in the refrigerator for up to 5 days. When you’re ready to enjoy a refrigerated muffin, a quick warm-up in the microwave for 15-20 seconds will bring back their soft, moist texture.
To Freeze: For longer-term storage, these muffins freeze beautifully. Place the thoroughly cooled muffins in a freezer-safe container. I particularly love using Stasher bags for their reusability and airtight seal. They will stay fresh in the freezer for up to 3 months. To thaw, simply let them sit at room temperature for a couple of hours, or for a quicker option, microwave them in 30-second increments until they are warmed through to your liking. Enjoying a warm, freshly baked taste from the freezer has never been easier!
Explore More Wholesome Muffin Recipes!
If you love these protein-packed banana muffins, you’ll definitely want to try some of my other healthy and delicious muffin creations:
- Fluffy Almond Flour Blackberry Muffins
- Gluten-free Banana Bread Muffins
- Gluten-free Apple Cinnamon Oat Muffins
- Gluten-free Mini Chocolate Chip Muffins (dairy free)
If you make this recipe, please let me know what you think! I would so appreciate you leaving a star rating and/or comment below. And don’t forget to share a photo on Instagram or Facebook and mention @CleanPlateMama!
Eat Clean. Be Well!
-Sara

Banana Protein Muffins
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Equipment
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1 Large Mixing Bowl
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1 Muffin Pan (standard 12-cup)
Ingredients
- 1 cup mashed ripe bananas (about 3 medium bananas, preferably previously frozen and thawed)
- 2 large eggs, room temperature
- ¼ cup drippy natural peanut butter (just peanuts and salt)
- ¼ cup pure maple syrup
- 1 tsp. pure vanilla extract
- 1 cup oat flour (certified gluten-free if necessary, organic recommended)
- ½ cup vanilla or unflavored plant-based protein powder (high-quality, clean ingredients recommended)
- 1 tsp. ground cinnamon
- 1 ½ tsp. baking powder
- ½ tsp. fine sea salt
- ⅓ cup dairy-free chocolate chips (optional, for added sweetness and flavor)
Instructions
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Preheat your oven to 350°F (175°C). Prepare a standard 12-cup muffin tin by lining 9 muffin cavities with paper liners, or lightly grease them. Set the prepared muffin tin aside.
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In a large mixing bowl, combine the mashed bananas, room temperature eggs, drippy peanut butter, pure maple syrup, and vanilla extract. Whisk thoroughly until all the wet ingredients are smoothly and evenly combined.
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Add the oat flour, protein powder, cinnamon, baking powder, and salt to the mashed banana mixture. Using a spatula or wooden spoon, mix just until the dry ingredients are fully incorporated into the wet ingredients. Be careful not to overmix the batter; a few small lumps are fine. If you’re using chocolate chips, gently fold them into the batter at this stage.
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Evenly divide the muffin batter among the 9 prepared muffin cups. The batter should fill each cup about ¾ of the way to allow for proper rising.
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Bake for 14-16 minutes, or until a toothpick inserted into the center of a muffin comes out clean. This indicates they are fully cooked. Allow the muffins to cool slightly in the pan for a few minutes before carefully transferring them to a wire rack to cool completely.
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Serve warm or at room temperature and enjoy your delicious, healthy banana protein muffins!
Notes
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- For the best results, use previously frozen bananas. They provide more natural sweetness as well as moisture to these muffins, contributing to a more tender crumb.
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- For the best texture and proper emulsification, use room temperature eggs (place them in a bowl of hot water for 10 minutes to quickly get to room temp if needed).
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- I strongly recommend using a plant-based protein powder for this recipe. Whey protein may make these muffins too dense and dry; I have only tested and achieved optimal results with a plant-based variety.