Irresistibly Fluffy Almond Flour Blackberry Muffins: Your Go-To Gluten-Free, Paleo & Dairy-Free Treat
Welcome to your new favorite breakfast, snack, or healthy dessert: these incredible almond flour blackberry muffins! Imagine a golden-brown top, perfectly crisp, giving way to a soft, moist, and fluffy interior. Each bite is a delightful explosion of sweet, juicy blackberries and warm vanilla, all wrapped up in a muffin that’s not only incredibly delicious but also caters to a variety of dietary needs. What’s even better? They’re surprisingly easy to make, require just one bowl, and can be ready to enjoy in about 30 minutes!
If you’re new to the wonderful world of baking with almond flour, prepare to be amazed. It’s a fantastic alternative to traditional wheat flour, offering a naturally gluten-free and grain-free base for your favorite baked goods. After mastering these blackberry beauties, be sure to explore more of my almond flour creations, like my Paleo biscuits and mouth-watering almond flour blueberry lemon bread. You’ll quickly discover how versatile and rewarding this ingredient can be!

For me, healthy muffins, especially these almond flour blackberry muffins, are truly a culinary cornerstone. They’re my ultimate go-to for so many occasions. Start your day with them for a wholesome breakfast, pack them into lunchboxes for a nutritious alternative to sandwiches, or simply enjoy one as a satisfying afternoon snack. My daughters adore finding these in their lunches, and as a parent, I love the peace of mind knowing they’re fueling their bodies with simple, clean, and nutritious ingredients.
Muffins are also a superstar when it comes to food prep! I find myself baking a batch almost every week. If these delightful blackberry muffins aren’t gracing our kitchen counter, you’ll likely find us enjoying my fluffy gluten-free banana muffins, sweet gluten-free mini chocolate chip muffins, energizing protein-packed banana muffins, or comforting apple cinnamon oat muffins. The possibilities are endless, and healthy baking has never been easier or more delicious!
Why These Almond Flour Blackberry Muffins Are Your Next Favorite Recipe
There are so many reasons to fall in love with these delightful almond flour blackberry muffins. They’re more than just a tasty treat; they’re a convenient, healthy, and satisfying option for anyone looking for wholesome baked goods.
- Low Sugar and Low Carb: In today’s world, managing sugar intake is a priority for many. These muffins are a fantastic choice, containing only about 5 grams of added sugar per serving. Compared to traditional muffins loaded with refined sugars and wheat flour, they offer a significantly lower carbohydrate count, making them a smarter indulgence without compromising on flavor.
- Fits Many Dietary Needs: Finding delicious recipes that accommodate specific dietary requirements can be a challenge. These muffins effortlessly meet several needs, being certified gluten-free, dairy-free, and Paleo-friendly. They’re crafted using only clean-eating, wholesome ingredients, meaning you can enjoy them without worry, whether you have an intolerance or simply prefer a cleaner diet.
- Incredibly Easy to Make: Simplicity is key in a busy kitchen, and this recipe delivers! You literally need just one bowl to mix all the ingredients, cutting down on both prep time and cleanup. From start to oven, these muffins are ready in a remarkable 10 minutes, perfect for those mornings when you crave something homemade but are short on time.
- Perfect, Irresistible Texture: The texture of a muffin can make or break the experience. These almond flour blackberry muffins boast an ideal consistency: soft, wonderfully fluffy, and beautifully moist on the inside. The golden-brown, pebbly top adds a satisfying slight crispness, exactly what you look for in a perfectly baked muffin.
Essential Ingredients for Your Blackberry Muffins
Crafting these delectable muffins starts with selecting the right ingredients. Here’s a visual of the wholesome components you’ll need to create this amazing recipe.

Ingredient Notes & Smart Substitutions
While a complete list of ingredients and their precise amounts can be found in the recipe card below, here are some specific call-outs and helpful substitution tips to ensure your muffins turn out perfectly every time.
ALMOND FLOUR: The star of this recipe! For the best texture, always opt for finely ground almond flour, often labeled as “blanched almond flour.” It’s made from almonds that have had their skins removed before grinding, resulting in a lighter, finer texture crucial for fluffy muffins. Avoid using “almond meal,” which is typically coarser and made from unblanched almonds with skins still on, as it can lead to a denser, greasier muffin. Almond flour is also a powerhouse of nutrients, rich in vitamin E, manganese, and other antioxidants, making it a more nutrient-dense and lower-carb alternative to traditional wheat flour.
TAPIOCA FLOUR: Also known as tapioca starch, this ingredient plays a vital role in giving these gluten-free muffins their perfect structure and chewiness. It acts as a binder, helping to prevent crumbly textures common in gluten-free baking. If you don’t have tapioca flour on hand, arrowroot starch (also called arrowroot powder) is an excellent 1:1 substitute that will yield similar results.
COCONUT OIL: This healthy fat contributes to the moistness and richness of the muffins. You’ll want to use melted coconut oil for easy incorporation into the batter. If you prefer, or if coconut oil isn’t available, high-quality avocado oil can be used as a direct substitute. Both options are Paleo-friendly and contribute a subtle, pleasant flavor.
EGGS: Eggs provide structure, moisture, and help with leavening. For optimal results and a better rise, I highly recommend using room temperature eggs. Cold eggs can stiffen melted fats and hinder the batter from rising as nicely. To quickly bring eggs to room temperature, simply place them in a bowl of warm (not hot) water for 5-10 minutes, or run them under hot tap water for 1-2 minutes.
APPLE CIDER VINEGAR: Don’t skip this ingredient! Apple cider vinegar (or fresh lemon juice) reacts with the baking soda in the recipe, creating carbon dioxide bubbles that help the muffins rise beautifully and achieve that desirable light, airy texture. If you omit it entirely, your muffins will still be tasty, but they may not be as light and fluffy as intended.
UNSWEETENED DAIRY-FREE MILK: To keep these muffins strictly Paleo and dairy-free, I typically use unsweetened almond milk. Unsweetened coconut milk (from a carton, not canned full-fat coconut milk) is another excellent Paleo-approved alternative. If your diet doesn’t require these restrictions, regular cow’s milk can be used interchangeably.
Clean Food Tip: When selecting dairy-free milks like almond milk, always make it a habit to check the ingredient label carefully. Many brands contain added sugars, thickeners, or preservatives that aren’t ideal for clean eating. Look for brands with minimal ingredients, such as just almonds and water. Some of my personal favorites for their clean ingredients are Malk Organics and Elmhurst 1925.
Exciting Variations to Customize Your Muffins
The beauty of this almond flour muffin base is its incredible versatility! It serves as a perfect canvas for a myriad of flavor combinations. Don’t hesitate to get creative and try one of these delicious variations to suit your taste or what you have on hand.
- Swap the Berries: Don’t have fresh blackberries? No problem at all! This recipe works wonderfully with other berries. Feel free to use blueberries, raspberries, or chopped strawberries instead. Each berry will lend its unique sweetness and tartness to the muffins. If using frozen berries, see our FAQ section for tips to avoid a purple batter.
- Add a Zesty Lemon Twist: For a bright, citrusy counterpoint to the sweet berries, transform these into delicious lemon blackberry muffins! Simply add the zest of one whole lemon and 2 tablespoons of fresh lemon juice to the wet ingredients. The lemon will enhance the blackberry flavor beautifully.
- Double Down on Almond Flavor: If you’re an almond lover, elevate the almond profile even further. Incorporate 1 teaspoon of almond extract into the wet ingredients instead of vanilla extract for a more intense almond blackberry flavor. For added texture and a lovely presentation, top the muffins with a sprinkle of sliced almonds before baking, or gently fold them directly into the batter.
- Indulge with Chocolate Chips: Sometimes, you just need chocolate! Skip the fruit entirely and fold in ½ cup of your favorite chocolate chips for a decadent treat. (Please note: If you opt for chocolate chips, these muffins will no longer be considered Paleo-approved, as most chocolate chips contain sugar and sometimes dairy. Look for sugar-free or dairy-free chocolate chips if you need to maintain those dietary restrictions).
- Spice It Up: For a warmer, cozier muffin, consider adding ½ teaspoon of cinnamon or a pinch of nutmeg to your dry ingredients. This works particularly well with mixed berries or apple variations.
- Create a Crumble Topping: For an extra layer of texture and sweetness, prepare a simple streusel topping. Combine 2 tablespoons almond flour, 1 tablespoon melted coconut oil, 1 tablespoon maple syrup, and a dash of cinnamon. Sprinkle this mixture over the muffin batter before baking.
How to Make Perfect Almond Flour Blackberry Muffins: A Step-by-Step Guide
Whipping up these delightful muffins is a straightforward process, making them accessible even for novice bakers. Follow these simple steps for perfectly baked, wholesome treats every time.

Step 1: Prepare Your Batter Foundation. Begin by combining all the dry ingredients – almond flour, tapioca flour, coconut flour, baking soda, and salt – in a large mixing bowl. Whisk them together thoroughly to ensure they are well distributed. Once mixed, create a noticeable well in the center of the dry ingredients. This ‘well’ is where you’ll add your wet ingredients, making the initial mixing much easier and preventing lumps. Pour in the eggs, melted coconut oil, dairy-free milk, maple syrup, apple cider vinegar, and vanilla extract into this well.

Step 2: Combine Wet and Dry Ingredients. Before incorporating the dry mix, take a moment to whisk the eggs thoroughly with the other wet ingredients in the well. This helps break down the eggs and ensures an even mix. Once the wet ingredients are well combined, gradually draw the dry ingredients from the sides of the bowl into the wet mixture. Mix until all ingredients are just fully combined. Be careful not to overmix, as this can lead to a tougher texture in gluten-free baking.

Step 3: Incorporate the Blackberries. Now for the star fruit! Add your sliced (or whole, if small) blackberries to the batter. Using a spatula, gently fold them in. The key word here is “gently”—avoid vigorous stirring, as this can crush the delicate berries and turn your batter purple, affecting both appearance and texture. Just a few folds are enough to distribute them evenly throughout the batter.

Step 4: Bake to Golden Perfection. Evenly divide the muffin batter among the 12 cavities of a prepared muffin tin (either lightly greased or lined with paper liners). For beautiful, consistent muffin tops, consider using a spring-loaded cookie scoop. Bake in a preheated oven at 350°F (175°C) for 20-22 minutes, or until the tops are golden brown and a toothpick inserted into the center comes out clean. Allow the muffins to cool in the pan for a few minutes before transferring them to a wire rack to cool completely. This helps them set and prevents sticking.
Is This Almond Flour Blackberry Muffin Recipe Keto-Friendly?
While these almond flour blackberry muffins are certainly lower in carbohydrates compared to traditional muffins made with wheat flour and refined sugar, the recipe as written is not strictly keto-friendly. The primary reasons are the inclusion of tapioca flour and pure maple syrup. Tapioca flour, while gluten-free, is a starch and contains a significant amount of carbohydrates, which are generally avoided on a strict ketogenic diet. Maple syrup, although a natural sweetener, is still a form of sugar and thus contributes to the overall carbohydrate count.
However, if you are following a keto diet and love the idea of these delicious muffins, it is possible to adapt the recipe. To make these a keto blackberry muffin, you would need to make two key substitutions:
- Omit the Tapioca Flour: Remove the tapioca flour from the dry ingredients. You might notice a slight difference in texture (they may be a bit more delicate or less chewy), but they will still be delicious.
- Replace Maple Syrup with a Keto Sweetener: Substitute the pure maple syrup with an approved 1:1 keto sweetener. Excellent options include erythritol-based sweeteners like Swerve, or monk fruit sweeteners. Always choose a granular or liquid sweetener that measures similarly to maple syrup to maintain the proper sweetness and wet ingredient balance.
With these modifications, you can enjoy a truly keto-compliant blackberry muffin that aligns with your dietary goals without sacrificing flavor.

Frequently Asked Questions About These Muffins
For the absolute best results and a light, fluffy texture, always use finely ground blanched almond flour. This type of almond flour has a consistent, fine texture that mimics traditional flour better. It’s crucial to make sure you’re using almond flour and not “almond meal,” which is coarser and can make your muffins denser and heavier. Read your labels carefully!
While fresh blackberries are recommended as they tend to release less liquid during baking, you can certainly use frozen berries. Just be aware that frozen berries release more moisture as they thaw and bake, which might result in a slightly more purple hue throughout your muffins from the berry juice. To minimize this, you can toss the frozen berries with about a tablespoon of the dry flour mixture before gently folding them into the batter. This helps to absorb some of the excess moisture.
This depends on the size of your blackberries! If your blackberries are on the larger side, I definitely recommend slicing them in half. This isn’t strictly necessary for the recipe to work, but it ensures a much better and more even distribution of blackberry flavor and texture throughout each muffin. If you have smaller blackberries, you can absolutely leave them whole.
Almond flour offers a wealth of nutritional benefits! It’s an excellent source of healthy fats, particularly monounsaturated fats, and is rich in important micronutrients like vitamin E (a powerful antioxidant), manganese, magnesium, and fiber. It’s also a fantastic low-carb and gluten-free alternative to wheat and other grain flours, making it suitable for Paleo, gluten-free, and low-carb diets. Its lower glycemic index means it causes a slower, steadier rise in blood sugar compared to traditional flours, providing more sustained energy.

How to Properly Store Your Almond Flour Blackberry Muffins
To keep your delicious blackberry muffins fresh and enjoyable for as long as possible, proper storage is key. Since these muffins are made with wholesome, clean ingredients and no artificial preservatives, they require a bit more attention than store-bought varieties.
These almond flour blackberry muffins should always be stored in an airtight container. At room temperature, they will stay fresh for up to 2 days. For optimal freshness and to significantly extend their shelf life, I highly recommend storing them in the refrigerator. When stored in the fridge, they will remain fresh for up to a week. Before enjoying a refrigerated muffin, let it sit at room temperature for 10-15 minutes to soften, or warm it briefly in the microwave for that fresh-baked feel.
For longer-term storage, these muffins freeze beautifully! Once completely cooled, place them in a freezer-safe airtight container or a heavy-duty freezer bag. They can be stored in the freezer for up to 3 months. To enjoy, simply thaw them at room temperature for a few hours, or gently reheat in the microwave or a toaster oven until warmed through.

Expert Tips for Muffin Perfection
Achieving bakery-quality almond flour blackberry muffins at home is easier than you think with these expert tips and tricks:
Measure Almond Flour Correctly: Almond flour is different from wheat flour and should be measured with care. When measuring almond flour, gently scoop it into your measuring cup and then level it off with a straight edge. Do not pack it down into the cup, as this will result in using too much flour, leading to dry and dense muffins.
Gently Fold the Blackberries: This is a crucial step to maintain the beautiful appearance and distinct flavor of your muffins. If you’re new to “folding” in berries, be very careful not to mix vigorously. Overmixing will crush the delicate berries, releasing their juices and turning your batter (and ultimately your muffins) an undesirable purple color. Use a spatula to gently scrape around the outside of the bowl and underneath the batter, lifting and folding it a few times until the blackberries are just incorporated.
Always Use Room Temperature Eggs: This might seem like a small detail, but using room temperature eggs can significantly impact the final texture of your muffins. Room temp eggs emulsify better with other ingredients, creating a smoother batter, and allow for better leavening, which translates to a higher, fluffier rise during baking. To quickly bring eggs to room temperature, simply run them under warm tap water for 1-2 minutes.
Use a Spring-Loaded Cookie Scoop: For professional-looking muffins with beautifully rounded, uniform tops, a spring-loaded cookie scoop is your secret weapon! It helps you portion the batter evenly into each muffin cup, ensuring consistent baking and that appealing domed top.
Allow Muffins to Cool Before Removing: Patience is a virtue, especially when baking with almond flour. Almond flour baked goods are more delicate and prone to crumbling when warm compared to those made with regular gluten-containing flour. Allow your muffins to cool in the muffin pan for at least 10-15 minutes after removing them from the oven. This gives them time to set and firm up, making them much easier to remove without breaking.
Don’t Overfill Muffin Cups: To prevent overflow and ensure even baking, aim to fill each muffin cup about two-thirds full. This leaves enough room for the muffins to rise without spilling over the edges.
Line Your Muffin Pan: While the recipe suggests greasing, using paper or silicone muffin liners can make cleanup a breeze and further prevent sticking, especially with delicate gluten-free batters.
Discover More Delicious Almond Flour Recipes!
If you’ve loved baking with almond flour in this recipe, you’re in for a treat! It’s truly a game-changer for healthy, gluten-free baking. Explore these other fantastic almond flour recipes from my kitchen to yours, each one designed to be wholesome, delicious, and easy to make:
- Paleo Almond Flour Donuts
- Paleo Almond Flour Biscuits
- Almond Flour Blueberry Lemon Bread
- Almond Flour Biscotti
If you give this delicious Almond Flour Blackberry Muffin recipe a try, please let me know what you think! Your feedback truly brightens my day. I would be so grateful if you could leave a star rating and/or a comment below to share your experience. And don’t forget to spread the love and share a photo of your beautiful muffins on Instagram or Facebook, making sure to mention @CleanPlateMama! Happy baking!
Eat Clean. Live Well!
-Sara

Almond Flour Blackberry Muffins
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Rate
Breakfast, Muffins/Breads, snacks
American
Gluten Free
10 minutes
20 minutes
30 minutes
12 muffins
Sara
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Equipment
-
1 Large Mixing Bowl -
1 12-cup Muffin Pan -
Whisk or Spatula -
Muffin Liners (optional)
Ingredients
-
2 ½ cups finely ground blanched almond flour -
½ cup tapioca flour (or arrowroot starch) -
¼ cup coconut flour -
1 tsp. baking soda -
¼ tsp. fine sea salt -
3 large eggs (at room temperature) -
¼ cup coconut oil, melted (or avocado oil) -
¼ cup unsweetened dairy-free milk (almond or coconut milk recommended for Paleo) -
⅓ cup pure maple syrup -
1 tbsp. apple cider vinegar (or fresh lemon juice) -
1 tsp. pure vanilla extract -
1 cup fresh blackberries, sliced in half if large
Instructions
-
1. Prepare Oven and Muffin Pan: Preheat your oven to 350 degrees F (175 degrees C). Lightly grease a 12-cup muffin pan, or for easier cleanup, line each cup with paper or silicone muffin liners. Set the prepared pan aside.
-
2. Combine Dry Ingredients: In a large mixing bowl, thoroughly combine the almond flour, tapioca flour, coconut flour, baking soda, and fine sea salt. Use a whisk to ensure all dry ingredients are evenly distributed.
-
3. Add Wet Ingredients and Mix: Create a well in the center of your dry ingredients. Pour in the room temperature eggs, melted coconut oil, unsweetened dairy-free milk, pure maple syrup, apple cider vinegar, and pure vanilla extract. First, whisk the wet ingredients together in the well until well combined. Then, gently mix the wet ingredients into the dry ingredients until all components are just fully combined and no dry streaks remain. Be careful not to overmix the batter.
-
4. Fold in Blackberries: Add your sliced (or whole, if small) fresh blackberries to the batter. Using a spatula, gently fold the blackberries into the batter until they are evenly distributed. Avoid overmixing to prevent crushing the berries and coloring the batter.
-
5. Fill Muffin Cups: Evenly scoop the muffin batter into the prepared 12-cavity muffin pan. Fill each cup about two-thirds full for best results. A spring-loaded cookie scoop can help create uniform muffins.
-
6. Bake to Perfection: Bake the muffins in your preheated oven for 20-22 minutes. The muffins are done when their tops are beautifully golden brown and a toothpick inserted into the center of a muffin comes out clean or with moist crumbs, but no wet batter.
-
7. Cool and Enjoy: Allow the muffins to cool in the muffin pan for at least 10-15 minutes before carefully removing them. This helps them firm up and prevents crumbling. Once removed, transfer them to a wire rack to cool completely. Serve warm or at room temperature, and enjoy your delicious, healthy homemade muffins!
Notes
- Measuring Almond Flour: Remember to scoop almond flour into your measuring cup and level it off. Do not pack it down, as this will lead to an incorrect measurement and potentially dry muffins.
- Room Temperature Eggs: If your eggs are cold, simply place them under warm running water for 1-2 minutes to quickly bring them to room temperature before adding to the batter.
- Berry Size: For even distribution and a prettier presentation, if your blackberries are on the larger side, I highly recommend slicing them in half before gently folding them into the batter.
- Scooping Batter: A spring-loaded cookie scoop is excellent for scooping muffin batter. It helps create uniform muffins with lovely rounded tops, ensuring consistent baking and presentation.
- Storage Tips: These homemade muffins are best stored in an airtight container. They will stay fresh at room temperature for up to 2 days. To extend their freshness, keep them in the refrigerator for up to a week, or freeze them for up to 3 months. Let refrigerated muffins come to room temp or warm slightly before eating.
Nutrition
Calories:
247
kcal
|
Carbohydrates:
18
g
|
Protein:
7
g
|
Fat:
18
g
|
Saturated Fat:
5
g
|
Polyunsaturated Fat:
1
g
|
Monounsaturated Fat:
1
g
|
Trans Fat:
1
g
|
Cholesterol:
41
mg
|
Sodium:
177
mg
|
Potassium:
64
mg
|
Fiber:
4
g
|
Sugar:
7
g
|
Vitamin A:
104
IU
|
Vitamin C:
3
mg
|
Calcium:
75
mg
|
Iron:
1
mg
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